Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | FCU47_22505 | Not Available | Positive | 4577708 - 4579069 | 49790.5 |
| 30s ribosomal protein s16 | FCU47_22510 | Not Available | Positive | 4579206 - 4579454 | 9191.08 |
| ribosome maturation factor rimm | FCU47_22515 | Not Available | Positive | 4579473 - 4580021 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | FCU47_22520 | Not Available | Positive | 4580052 - 4580819 | 28424.0 |
| 50s ribosomal protein l19 | FCU47_22525 | Not Available | Positive | 4580861 - 4581208 | 13134.0 |
| ompa family protein | FCU47_22530 | Not Available | Negative | 4581284 - 4581766 | 17259.6 |
| diguanylate cyclase dgcn | FCU47_22535 | Not Available | Negative | 4581782 - 4583008 | 45926.0 |
| duf4154 domain-containing protein | FCU47_22540 | Not Available | Negative | 4582998 - 4583516 | 18979.2 |
| duf2799 domain-containing protein | FCU47_22545 | Not Available | Negative | 4583666 - 4584031 | 13204.3 |
| 3-deoxy-7-phosphoheptulonate synthase arof | FCU47_22550 | Not Available | Positive | 4584241 - 4585311 | 38820.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





