Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | FCU47_22395 | Not Available | Negative | 4553635 - 4554243 | 22546.3 |
| hypothetical protein | FCU47_22400 | Not Available | Positive | 4554472 - 4554767 | 9904.05 |
| hypothetical protein | FCU47_22405 | Not Available | Negative | 4554803 - 4555672 | 32803.4 |
| type i restriction endonuclease subunit r | FCU47_22415 | Not Available | Negative | 4556902 - 4560141 | 120093.0 |
| restriction endonuclease subunit s | FCU47_22420 | Not Available | Negative | 4560200 - 4561393 | 44809.6 |
| sam-dependent dna methyltransferase | FCU47_22425 | Not Available | Negative | 4561390 - 4562937 | 57752.6 |
| chromosome partitioning protein parb | FCU47_22435 | Not Available | Negative | 4564534 - 4565430 | 33838.4 |
| parb/repb/spo0j family partition protein | FCU47_22440 | Not Available | Negative | 4565427 - 4566323 | 34064.5 |
| recombinase family protein | FCU47_22445 | Not Available | Negative | 4566313 - 4567869 | 60385.6 |
| duf4102 domain-containing protein | FCU47_22450 | Not Available | Negative | 4568152 - 4569381 | 46644.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





