Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU47_22240 | Not Available | Negative | 4519783 - 4520124 | 12553.0 |
| xylulokinase | FCU47_22245 | Not Available | Negative | 4520293 - 4521747 | 52719.5 |
| xylose isomerase | FCU47_22250 | Not Available | Negative | 4521819 - 4523141 | 49735.7 |
| d-xylose abc transporter substrate-binding protein | FCU47_22255 | Not Available | Positive | 4523507 - 4524499 | 35722.1 |
| d-xylose abc transporter atp-binding protein | FCU47_22260 | Not Available | Positive | 4524577 - 4526118 | 56459.9 |
| xylose abc transporter permease xylh | FCU47_22265 | Not Available | Positive | 4526096 - 4527277 | 41033.5 |
| xylr family transcriptional regulator | FCU47_22270 | Not Available | Positive | 4527355 - 4528533 | 44871.7 |
| protein bax | FCU47_22275 | Not Available | Negative | 4528641 - 4529465 | 30869.3 |
| alpha-amylase | FCU47_22280 | Not Available | Positive | 4529785 - 4531815 | 75771.5 |
| valine--pyruvate transaminase | FCU47_22285 | Not Available | Positive | 4531993 - 4533246 | 46689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





