Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | FCU47_21420 | Not Available | Positive | 4369035 - 4370249 | 43577.4 |
| heavy metal sensor histidine kinase | FCU47_21435 | Not Available | Negative | 4371800 - 4373158 | 50871.7 |
| response regulator transcription factor hprr | FCU47_21440 | Not Available | Negative | 4373158 - 4373829 | 25010.2 |
| hydroxyisourate hydrolase | FCU47_21445 | Not Available | Positive | 4373962 - 4374375 | 15509.5 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | FCU47_21450 | Not Available | Positive | 4374484 - 4375488 | 37384.9 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | FCU47_21455 | Not Available | Positive | 4375489 - 4376124 | 24067.6 |
| metal-binding protein zint | FCU47_21460 | Not Available | Positive | 4376360 - 4377031 | 25567.2 |
| Trna-ser | Not Available | Not Available | Positive | 4377701 - 4377790 | Not Available |
| dgsa anti-repressor mtfa | FCU47_21470 | Not Available | Positive | 4377884 - 4378681 | 30239.7 |
| Trna-asn | Not Available | Not Available | Positive | 4378782 - 4378857 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





