Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein/nucleic acid deglycase | FCU47_21060 | Not Available | Positive | 4306575 - 4307093 | 18859.4 |
| hypothetical protein | FCU47_21065 | Not Available | Negative | 4307073 - 4307516 | 16777.2 |
| dna damage response exodeoxyribonuclease yhbq | FCU47_21070 | Not Available | Positive | 4307567 - 4307869 | 11242.5 |
| n-acetyltransferase | FCU47_21075 | Not Available | Negative | 4307856 - 4308359 | 18534.8 |
| scp2 domain-containing protein | FCU47_21080 | Not Available | Negative | 4308353 - 4308877 | 19686.0 |
| u32 family peptidase | FCU47_21085 | Not Available | Positive | 4309086 - 4310081 | 37035.2 |
| u32 family peptidase | FCU47_21090 | Not Available | Positive | 4310090 - 4310968 | 32537.1 |
| llm class flavin-dependent oxidoreductase | FCU47_21095 | Not Available | Positive | 4311174 - 4312181 | 37108.4 |
| tryptophan permease | FCU47_21100 | Not Available | Negative | 4312299 - 4313543 | 44379.2 |
| dead/deah family atp-dependent rna helicase | FCU47_21105 | Not Available | Negative | 4313697 - 4315586 | 70550.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





