Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110-like element is5075 family transposase | FCU47_21005 | Not Available | Negative | 4292638 - 4293642 | 37527.7 |
| fimbrial biogenesis outer membrane usher protein | FCU47_21015 | Not Available | Positive | 4296468 - 4298840 | 88239.6 |
| fimbrial protein | FCU47_21020 | Not Available | Positive | 4298851 - 4299942 | 38452.5 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | FCU47_21025 | Not Available | Negative | 4299985 - 4300845 | 31349.7 |
| penicillin-binding protein activator | FCU47_21030 | Not Available | Positive | 4300910 - 4302946 | 72815.2 |
| yran family protein | FCU47_21035 | Not Available | Positive | 4302904 - 4303299 | 14784.4 |
| dnaa initiator-associating protein diaa | FCU47_21040 | Not Available | Positive | 4303319 - 4303909 | 21107.3 |
| divisome-associated lipoprotein yrap | FCU47_21045 | Not Available | Positive | 4303919 - 4304494 | 20029.1 |
| permease | FCU47_21050 | Not Available | Negative | 4304699 - 4305739 | 37318.9 |
| nad-dependent epimerase/dehydratase family protein | FCU47_21055 | Not Available | Negative | 4305812 - 4306447 | 23213.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





