Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter ydik | FCU47_00885 | Not Available | Positive | 173209 - 174321 | 39843.7 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 174507 - 174614 | Not Available |
| duf1870 family protein | FCU47_00895 | Not Available | Positive | 174750 - 175106 | 13929.7 |
| mfs transporter | FCU47_00900 | Not Available | Positive | 175206 - 176420 | 44573.7 |
| mfs transporter | FCU47_00905 | Not Available | Positive | 176647 - 177912 | 46036.9 |
| quinate/shikimate dehydrogenase | FCU47_00910 | Not Available | Positive | 177924 - 178790 | 31239.7 |
| type i 3-dehydroquinate dehydratase | FCU47_00915 | Not Available | Positive | 178821 - 179579 | 27521.3 |
| acyl coa:acetate/3-ketoacid coa transferase | FCU47_00920 | Not Available | Positive | 179724 - 181319 | 57530.6 |
| acyl-coa dehydrogenase | FCU47_00925 | Not Available | Positive | 181333 - 182484 | 43004.6 |
| arac family transcriptional regulator | FCU47_00930 | Not Available | Negative | 182527 - 183438 | 34896.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





