Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [citrate (pro-3s)-lyase] ligase | FCU47_20130 | Not Available | Negative | 4141947 - 4143005 | 40079.5 |
| sensor histidine kinase dpib | FCU47_20135 | Not Available | Positive | 4143385 - 4145043 | 61659.7 |
| two-component response regulator dpia | FCU47_20140 | Not Available | Positive | 4145012 - 4145692 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | FCU47_20145 | Not Available | Negative | 4145733 - 4147118 | 48415.3 |
| phospholipid:lipid a palmitoyltransferase | FCU47_20150 | Not Available | Positive | 4147707 - 4148267 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | FCU47_20155 | Not Available | Positive | 4148442 - 4148651 | 7463.84 |
| fluoride efflux transporter crcb | FCU47_20160 | Not Available | Negative | 4148705 - 4149088 | 13796.2 |
| deaminated glutathione amidase | FCU47_20165 | Not Available | Positive | 4149181 - 4149969 | 28683.0 |
| twin-arginine translocase subunit tate | FCU47_20170 | Not Available | Positive | 4150098 - 4150301 | 7024.71 |
| lipoyl synthase | FCU47_20175 | Not Available | Negative | 4150402 - 4151367 | 36073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





