Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | FCU47_18625 | Not Available | Positive | 3855096 - 3857204 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | FCU47_18630 | Not Available | Positive | 3857211 - 3857900 | 25344.6 |
| atp-dependent dna helicase recg | FCU47_18635 | Not Available | Positive | 3857906 - 3859987 | 76444.1 |
| hypothetical protein | FCU47_18640 | Not Available | Negative | 3859972 - 3860838 | 33234.7 |
| sodium/glutamate symporter | FCU47_18645 | Not Available | Negative | 3860841 - 3862046 | 42445.9 |
| xanthine/proton symporter xanp | FCU47_18650 | Not Available | Positive | 3862326 - 3863717 | 48871.2 |
| asma family protein | FCU47_18655 | Not Available | Positive | 3863838 - 3865547 | 62277.8 |
| alpha-xylosidase | FCU47_18660 | Not Available | Negative | 3865599 - 3867917 | 87946.8 |
| glycoside-pentoside-hexuronide family transporter | FCU47_18665 | Not Available | Negative | 3867927 - 3869309 | 50951.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 3869602 - 3869692 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





