Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inverse autotransporter invasin ycho | FCU47_17940 | Not Available | Negative | 3727926 - 3729320 | 52117.7 |
| dsre/f sulfur relay family protein ychn | FCU47_17945 | Not Available | Positive | 3729505 - 3729858 | 12693.5 |
| gamma-glutamylcyclotransferase | FCU47_17950 | Not Available | Negative | 3729902 - 3730597 | 25476.7 |
| putative cation transport regulator chab | FCU47_17955 | Not Available | Negative | 3730755 - 3730985 | 8931.15 |
| sodium-potassium/proton antiporter chaa | FCU47_17960 | Not Available | Positive | 3731255 - 3732355 | 39166.9 |
| small toxic polypeptide ldrb | FCU47_17970 | Not Available | Positive | 3732760 - 3732867 | 3971.95 |
| small toxic polypeptide ldra/ldrc | FCU47_17980 | Not Available | Positive | 3733296 - 3733403 | 3930.95 |
| 3-deoxy-8-phosphooctulonate synthase | FCU47_17985 | Not Available | Negative | 3733551 - 3734405 | 30834.5 |
| tetratricopeptide repeat-containing protein | FCU47_17990 | Not Available | Negative | 3734441 - 3735250 | 30843.1 |
| sirb family protein | FCU47_17995 | Not Available | Negative | 3735254 - 3735646 | 14657.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





