Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphatase yhde | FCU47_17785 | Not Available | Negative | 3690722 - 3691315 | 21430.6 |
| rod shape-determining protein mred | FCU47_17790 | Not Available | Negative | 3691324 - 3691812 | 18788.9 |
| rod shape-determining protein mrec | FCU47_17795 | Not Available | Negative | 3691812 - 3692915 | 39562.8 |
| rod shape-determining protein | FCU47_17800 | Not Available | Negative | 3692981 - 3694024 | 36954.7 |
| rnase e specificity factor csrd | FCU47_17805 | Not Available | Negative | 3694329 - 3696269 | 73345.6 |
| oxidoreductase | FCU47_17810 | Not Available | Positive | 3696421 - 3697395 | 34771.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | FCU47_17815 | Not Available | Positive | 3698373 - 3698843 | 16688.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | FCU47_17820 | Not Available | Positive | 3698854 - 3700203 | 49323.7 |
| duf997 family protein | FCU47_17825 | Not Available | Positive | 3700312 - 3700554 | 9090.24 |
| sodium/pantothenate symporter | FCU47_17830 | Not Available | Positive | 3700544 - 3701995 | 51706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





