Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxc | FCU47_00585 | Not Available | Positive | 111200 - 113326 | 76726.9 |
| electron transport complex subunit rsxd | FCU47_00590 | Not Available | Positive | 113327 - 114385 | 38126.4 |
| electron transport complex subunit rsxg | FCU47_00595 | Not Available | Positive | 114389 - 115009 | 21913.1 |
| electron transport complex subunit e | FCU47_00600 | Not Available | Positive | 115013 - 115708 | 24460.5 |
| endonuclease iii | FCU47_00605 | Not Available | Positive | 115708 - 116343 | 23563.7 |
| dipeptide/tripeptide permease dtpa | FCU47_00610 | Not Available | Positive | 116954 - 118456 | 53994.4 |
| glutathione transferase gsta | FCU47_00615 | Not Available | Positive | 118562 - 119167 | 22903.6 |
| pyridoxal kinase pdxy | FCU47_00620 | Not Available | Negative | 119211 - 120071 | 31192.8 |
| tyrosine--trna ligase | FCU47_00625 | Not Available | Negative | 120133 - 121407 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | FCU47_00630 | Not Available | Negative | 121536 - 122192 | 25546.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





