Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase phoq | FCU47_15160 | Not Available | Negative | 3171672 - 3173132 | 55302.8 |
| two-component system response regulator phop | FCU47_15165 | Not Available | Negative | 3173132 - 3173803 | 25536.7 |
| adenylosuccinate lyase | FCU47_15170 | Not Available | Negative | 3173972 - 3175342 | 51545.7 |
| high frequency lysogenization protein hfld | FCU47_15175 | Not Available | Negative | 3175346 - 3175987 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | FCU47_15180 | Not Available | Negative | 3176023 - 3177129 | 40961.7 |
| phosphatase nudj | FCU47_15185 | Not Available | Negative | 3177183 - 3177644 | 17433.8 |
| 23s rrna pseudouridine(2457) synthase rlue | FCU47_15190 | Not Available | Negative | 3177654 - 3178307 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | FCU47_15195 | Not Available | Positive | 3178479 - 3179729 | 45772.4 |
| integrase | FCU47_15200 | Not Available | Negative | 3179843 - 3180985 | 43902.8 |
| excisionase | FCU47_15205 | Not Available | Negative | 3180975 - 3181211 | 8845.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





