Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU47_14345 | Not Available | Negative | 3017556 - 3018305 | 27664.3 |
| hth-type transcriptional regulator yidz | FCU47_14350 | Not Available | Negative | 3018462 - 3019421 | 36875.8 |
| multidrug efflux mfs transporter mdtl | FCU47_14355 | Not Available | Negative | 3019396 - 3020571 | 41492.2 |
| low affinity tryptophan permease tnab | FCU47_14360 | Not Available | Negative | 3020704 - 3021951 | 45237.3 |
| tryptophanase | FCU47_14365 | Not Available | Negative | 3022042 - 3023457 | 52776.4 |
| tryptophanase leader peptide | FCU47_14370 | Not Available | Negative | 3023678 - 3023752 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | FCU47_14375 | Not Available | Negative | 3023995 - 3025359 | 49199.8 |
| membrane protein insertase yidc | FCU47_14380 | Not Available | Negative | 3025465 - 3027111 | 61543.5 |
| membrane protein insertion efficiency factor yidd | FCU47_14385 | Not Available | Negative | 3027114 - 3027371 | 9381.61 |
| ribonuclease p protein component | FCU47_14390 | Not Available | Negative | 3027335 - 3027694 | 13790.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





