Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase dcus | FCU47_13890 | Not Available | Negative | 2922914 - 2924545 | 60553.4 |
| 4fe-4s mono-cluster protein yjdi | FCU47_13895 | Not Available | Positive | 2924726 - 2924956 | 8650.47 |
| n-acetyltransferase | FCU47_13900 | Not Available | Positive | 2924968 - 2925240 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | FCU47_13905 | Not Available | Positive | 2925467 - 2925763 | 11467.6 |
| type v toxin-antitoxin system toxin ghot | FCU47_13910 | Not Available | Positive | 2925791 - 2925964 | 6555.44 |
| lysine--trna ligase | FCU47_13915 | Not Available | Negative | 2926083 - 2927600 | 57829.9 |
| dipeptide/tripeptide permease dtpc | FCU47_13920 | Not Available | Negative | 2927837 - 2929294 | 53043.7 |
| lysine decarboxylase cada | FCU47_13925 | Not Available | Negative | 2929353 - 2931500 | 81264.7 |
| cadaverine/lysine antiporter | FCU47_13930 | Not Available | Negative | 2931580 - 2932914 | 46667.8 |
| hypothetical protein | FCU47_13935 | Not Available | Positive | 2933144 - 2933389 | 9447.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





