Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+) dicitrate transport atp-binding protein fece | FCU47_13525 | Not Available | Negative | 2842337 - 2843104 | 28192.5 |
| fe(3+) dicitrate abc transporter permease subunit fecd | FCU47_13530 | Not Available | Negative | 2843105 - 2844061 | 34152.7 |
| fe3+ dicitrate abc transporter permease | FCU47_13535 | Not Available | Negative | 2844058 - 2845056 | 34894.9 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | FCU47_13540 | Not Available | Negative | 2845053 - 2845955 | 33138.1 |
| fe(3+) dicitrate transport protein feca | FCU47_13545 | Not Available | Negative | 2846000 - 2848324 | 85269.2 |
| fec operon regulator fecr | FCU47_13550 | Not Available | Negative | 2848411 - 2849364 | 35534.1 |
| sigma-70 family rna polymerase sigma factor | FCU47_13555 | Not Available | Negative | 2849361 - 2849882 | 19481.5 |
| superoxide response transcriptional regulator soxs | FCU47_13565 | Not Available | Negative | 2850994 - 2851317 | 12911.6 |
| redox-sensitive transcriptional activator soxr | FCU47_13570 | Not Available | Positive | 2851403 - 2851867 | 17150.7 |
| ncs2 family permease | FCU47_13575 | Not Available | Positive | 2852413 - 2853762 | 45714.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





