Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1643 domain-containing protein | FCU47_13465 | Not Available | Negative | 2833127 - 2833456 | 12062.7 |
| recombinase family protein | FCU47_13470 | Not Available | Positive | 2833786 - 2834346 | 20339.6 |
| hypothetical protein | FCU47_13475 | Not Available | Positive | 2834360 - 2835205 | 31171.0 |
| hypothetical protein | FCU47_13480 | Not Available | Negative | 2835266 - 2835760 | 17882.4 |
| helix-turn-helix transcriptional regulator | FCU47_13485 | Not Available | Positive | 2836001 - 2836465 | 16969.1 |
| hypothetical protein | FCU47_13490 | Not Available | Positive | 2837503 - 2838327 | 31168.8 |
| hypothetical protein | FCU47_13495 | Not Available | Negative | 2838376 - 2838948 | 21711.4 |
| transposase | FCU47_13500 | Not Available | Positive | 2839049 - 2839399 | 13503.5 |
| is30-like element is30 family transposase | FCU47_13505 | Not Available | Negative | 2839319 - 2840470 | 44264.5 |
| hypothetical protein | FCU47_13520 | Not Available | Positive | 2841522 - 2841779 | 9464.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





