Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | FCU47_13215 | Not Available | Positive | 2774421 - 2774801 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | FCU47_13220 | Not Available | Negative | 2774924 - 2776867 | 70816.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | FCU47_13225 | Not Available | Positive | 2777057 - 2777797 | 27205.4 |
| ytfj family protein | FCU47_13230 | Not Available | Negative | 2777787 - 2778344 | 20618.9 |
| duf1107 domain-containing protein | FCU47_13235 | Not Available | Positive | 2778669 - 2778875 | 8072.24 |
| hlyc/corc family transporter | FCU47_13240 | Not Available | Negative | 2778937 - 2780280 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase msra | FCU47_13245 | Not Available | Negative | 2780603 - 2781241 | 23316.3 |
| autotransporter assembly complex protein tama | FCU47_13250 | Not Available | Positive | 2781447 - 2783180 | 64811.7 |
| autotransporter assembly complex protein tamb | FCU47_13255 | Not Available | Positive | 2783177 - 2786956 | 136735.0 |
| gamma-glutamylcyclotransferase | FCU47_13260 | Not Available | Positive | 2786959 - 2787300 | 12867.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





