Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU47_12050 | Not Available | Negative | 2528618 - 2529286 | 25590.3 |
| choline dehydrogenase | FCU47_12055 | Not Available | Negative | 2529499 - 2531169 | 61881.1 |
| betaine-aldehyde dehydrogenase | FCU47_12060 | Not Available | Negative | 2531183 - 2532655 | 52899.1 |
| transcriptional regulator beti | FCU47_12065 | Not Available | Negative | 2532669 - 2533256 | 21806.4 |
| choline bcct transporter bett | FCU47_12070 | Not Available | Positive | 2533385 - 2535418 | 75846.5 |
| hypothetical protein | FCU47_12075 | Not Available | Positive | 2535724 - 2535798 | 2629.59 |
| eal domain-containing protein | FCU47_12080 | Not Available | Positive | 2536293 - 2537381 | 40727.3 |
| lysr family transcriptional regulator | FCU47_12085 | Not Available | Negative | 2537423 - 2538355 | 34768.9 |
| duf1097 domain-containing protein | FCU47_12090 | Not Available | Negative | 2538447 - 2538944 | 17342.0 |
| ankyrin repeat domain-containing protein | FCU47_12095 | Not Available | Positive | 2539202 - 2539807 | 21638.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





