Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU47_11665 | Not Available | Negative | 2453896 - 2453976 | 3203.84 |
| hypothetical protein | FCU47_11670 | Not Available | Negative | 2454012 - 2454437 | 16286.5 |
| tetratricopeptide repeat protein | FCU47_11680 | Not Available | Positive | 2455346 - 2455837 | 19034.1 |
| hila family transcriptional regulator ygeh | FCU47_11685 | Not Available | Positive | 2456172 - 2457476 | 49882.0 |
| Trna-asp | Not Available | Not Available | Positive | 2457741 - 2457817 | Not Available |
| 2,5-didehydrogluconate reductase dkgb | FCU47_11700 | Not Available | Positive | 2457980 - 2458783 | 29438.4 |
| lysr family transcriptional regulator | FCU47_11705 | Not Available | Negative | 2458780 - 2459694 | 33793.8 |
| endonuclease/exonuclease/phosphatase family protein | FCU47_11710 | Not Available | Positive | 2459935 - 2460735 | 29993.4 |
| sam-dependent methyltransferase | FCU47_11715 | Not Available | Positive | 2460813 - 2461010 | 7033.34 |
| sam-dependent methyltransferase | FCU47_11720 | Not Available | Positive | 2460968 - 2461582 | 22877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





