Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator gcva | FCU47_11460 | Not Available | Negative | 2405944 - 2406861 | 34403.4 |
| ygdi/ygdr family lipoprotein | FCU47_11465 | Not Available | Negative | 2407212 - 2407439 | 8174.67 |
| cysteine desulfurase csda | FCU47_11470 | Not Available | Positive | 2407631 - 2408836 | 43294.7 |
| cysteine desulfurase sulfur acceptor subunit csde | FCU47_11475 | Not Available | Positive | 2408836 - 2409279 | 15913.1 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | FCU47_11480 | Not Available | Negative | 2409330 - 2410136 | 28534.6 |
| murein transglycosylase a | FCU47_11485 | Not Available | Negative | 2410375 - 2411472 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 2411681 - 2411757 | Not Available |
| amin domain-containing protein | FCU47_11495 | Not Available | Negative | 2411832 - 2413085 | 45637.1 |
| amino-acid n-acetyltransferase | FCU47_11500 | Not Available | Positive | 2413317 - 2414648 | 49228.2 |
| exodeoxyribonuclease v subunit alpha | FCU47_11505 | Not Available | Negative | 2414710 - 2416536 | 66807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





