Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU47_10995 | Not Available | Negative | 2309308 - 2310069 | 28453.2 |
| hydrogenase maturation peptidase hyci | FCU47_11000 | Not Available | Negative | 2310094 - 2310564 | 17085.6 |
| formate hydrogenlyase maturation protein hych | FCU47_11005 | Not Available | Negative | 2310557 - 2310967 | 15465.5 |
| formate hydrogenlyase subunit hycg | FCU47_11010 | Not Available | Negative | 2310964 - 2311731 | 27999.7 |
| formate hydrogenlyase subunit hycf | FCU47_11015 | Not Available | Negative | 2311731 - 2312273 | 20330.4 |
| hydrogenase large subunit | FCU47_11020 | Not Available | Negative | 2312283 - 2313992 | 64970.1 |
| formate hydrogenlyase subunit hycd | FCU47_11025 | Not Available | Negative | 2314010 - 2314933 | 33065.4 |
| formate hydrogenlyase subunit 3 | FCU47_11030 | Not Available | Negative | 2314936 - 2316762 | 64079.2 |
| 4fe-4s dicluster domain-containing protein | FCU47_11035 | Not Available | Negative | 2316759 - 2317370 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | FCU47_11040 | Not Available | Negative | 2317495 - 2317956 | 17627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





