Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide antibiotic transporter sbma | FCU47_10845 | Not Available | Negative | 2277882 - 2279102 | 46461.9 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | FCU47_10850 | Not Available | Positive | 2279454 - 2280611 | 41882.5 |
| hydrogen peroxide resistance inhibitor ipra | FCU47_10855 | Not Available | Negative | 2280612 - 2281235 | 23957.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | FCU47_10860 | Not Available | Negative | 2281323 - 2283968 | 94606.6 |
| is3 family transposase | FCU47_10865 | Not Available | Positive | 2284039 - 2284178 | 5440.94 |
| Trna-arg | Not Available | Not Available | Positive | 2284178 - 2284254 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2284258 - 2284350 | Not Available |
| carbon storage regulator csra | FCU47_10880 | Not Available | Negative | 2284666 - 2284851 | 6856.34 |
| alanine--trna ligase | FCU47_10885 | Not Available | Negative | 2285086 - 2287716 | 96009.8 |
| recombination regulator recx | FCU47_10890 | Not Available | Negative | 2287844 - 2288344 | 19439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





