Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | FCU47_10540 | Not Available | Negative | 2217145 - 2218419 | 46358.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | FCU47_10545 | Not Available | Negative | 2218545 - 2219168 | 23188.1 |
| trigger factor | FCU47_10550 | Not Available | Negative | 2219414 - 2220712 | 48195.4 |
| transcriptional regulator bola | FCU47_10555 | Not Available | Negative | 2221056 - 2221373 | 11994.3 |
| hypothetical protein | FCU47_10560 | Not Available | Positive | 2221678 - 2222256 | 20951.3 |
| muropeptide mfs transporter ampg | FCU47_10565 | Not Available | Positive | 2222300 - 2223775 | 53306.4 |
| cytochrome o ubiquinol oxidase subunit ii | FCU47_10570 | Not Available | Positive | 2224235 - 2225182 | 34899.1 |
| cytochrome o ubiquinol oxidase subunit i | FCU47_10575 | Not Available | Positive | 2225204 - 2227195 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit iii | FCU47_10580 | Not Available | Positive | 2227185 - 2227799 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit iv | FCU47_10585 | Not Available | Positive | 2227799 - 2228128 | 12030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





