Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose o-acetyltransferase | FCU47_10435 | Not Available | Positive | 2195927 - 2196478 | 20096.2 |
| hypothetical protein | FCU47_10440 | Not Available | Positive | 2196594 - 2197064 | 18268.2 |
| cyclic-guanylate-specific phosphodiesterase pdeb | FCU47_10445 | Not Available | Positive | 2197228 - 2198778 | 58773.8 |
| duf1428 domain-containing protein | FCU47_10450 | Not Available | Negative | 2198820 - 2199173 | 13318.9 |
| dna base-flipping protein | FCU47_10460 | Not Available | Positive | 2199474 - 2199863 | 14449.5 |
| hypothetical protein | FCU47_10465 | Not Available | Negative | 2199894 - 2200466 | 19442.3 |
| acyl-coa thioesterase ii | FCU47_10470 | Not Available | Positive | 2200684 - 2201544 | 31968.1 |
| ammonium transporter amtb | FCU47_10475 | Not Available | Negative | 2201593 - 2202879 | 44517.4 |
| p-ii family nitrogen regulator | FCU47_10480 | Not Available | Negative | 2202909 - 2203247 | 12259.9 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | FCU47_10485 | Not Available | Negative | 2203428 - 2205209 | 65258.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





