Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate deiminase | FCU47_10175 | Not Available | Positive | 2137345 - 2138580 | 45690.7 |
| (s)-ureidoglycine aminohydrolase | FCU47_10180 | Not Available | Positive | 2138591 - 2139376 | 28718.0 |
| glycerate 3-kinase | FCU47_10185 | Not Available | Negative | 2139604 - 2140749 | 38704.9 |
| uracil/xanthine transporter | FCU47_10190 | Not Available | Negative | 2140771 - 2142072 | 47228.2 |
| allantoinase allb | FCU47_10195 | Not Available | Negative | 2142129 - 2143490 | 49588.4 |
| putative allantoin permease | FCU47_10200 | Not Available | Negative | 2143550 - 2145004 | 52449.2 |
| 2-hydroxy-3-oxopropionate reductase | FCU47_10205 | Not Available | Negative | 2145173 - 2146051 | 30802.5 |
| hydroxypyruvate isomerase | FCU47_10210 | Not Available | Negative | 2146151 - 2146927 | 29370.1 |
| glyoxylate carboligase | FCU47_10215 | Not Available | Negative | 2146940 - 2148721 | 64735.5 |
| hth-type transcriptional repressor allr | FCU47_10220 | Not Available | Negative | 2148811 - 2149626 | 29271.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





