Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2776 domain-containing protein | FCU47_09295 | Not Available | Negative | 1950608 - 1951660 | 37659.3 |
| duf4049 domain-containing protein | FCU47_09300 | Not Available | Positive | 1952044 - 1953633 | 61008.1 |
| duf4049 domain-containing protein | FCU47_09305 | Not Available | Positive | 1953895 - 1955517 | 61397.0 |
| hlyd family secretion protein | FCU47_09310 | Not Available | Positive | 1955883 - 1956950 | 38839.6 |
| ribosome-associated atpase | FCU47_09315 | Not Available | Positive | 1956947 - 1959682 | 100775.0 |
| abc-2 transporter permease | FCU47_09320 | Not Available | Positive | 1959682 - 1960806 | 41050.2 |
| type ii toxin-antitoxin system hicb family antitoxin | FCU47_09330 | Not Available | Positive | 1961137 - 1961496 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | FCU47_09335 | Not Available | Negative | 1961616 - 1962017 | 15094.7 |
| nickel import atp-binding protein nike | FCU47_09340 | Not Available | Negative | 1962023 - 1962829 | 29700.5 |
| nickel import atp-binding protein nikd | FCU47_09345 | Not Available | Negative | 1962826 - 1963590 | 26835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





