Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | FCU47_09145 | Not Available | Positive | 1913681 - 1914745 | 39307.0 |
| dna oxidative demethylase alkb | FCU47_09150 | Not Available | Positive | 1914745 - 1915395 | 24031.7 |
| microcin j25 efflux abc transporter yoji | FCU47_09155 | Not Available | Positive | 1915471 - 1917114 | 61572.4 |
| malate dehydrogenase (quinone) | FCU47_09160 | Not Available | Positive | 1917332 - 1918978 | 60248.1 |
| transposase family protein | FCU47_09165 | Not Available | Positive | 1919356 - 1920975 | 61893.7 |
| atp-binding protein | FCU47_09170 | Not Available | Positive | 1920975 - 1922423 | 54901.0 |
| transposase | FCU47_09175 | Not Available | Positive | 1922464 - 1924020 | 59995.2 |
| hypothetical protein | FCU47_09180 | Not Available | Positive | 1924032 - 1924958 | 35821.4 |
| helix-turn-helix transcriptional regulator | FCU47_09185 | Not Available | Positive | 1925311 - 1925610 | 11199.5 |
| old family endonuclease | FCU47_09190 | Not Available | Positive | 1926174 - 1928000 | 67765.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





