Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | FCU47_08975 | Not Available | Negative | 1863744 - 1865396 | 62545.9 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | FCU47_08980 | Not Available | Negative | 1865396 - 1866286 | 33098.6 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | FCU47_08985 | Not Available | Negative | 1866283 - 1868265 | 74206.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | FCU47_08990 | Not Available | Negative | 1868265 - 1869233 | 36214.1 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | FCU47_08995 | Not Available | Negative | 1869237 - 1870376 | 41616.2 |
| histidine phosphatase family protein | FCU47_09000 | Not Available | Positive | 1870684 - 1871286 | 22295.8 |
| nucleoside triphosphatase nudi | FCU47_09005 | Not Available | Negative | 1871325 - 1871750 | 16371.6 |
| lipopolysaccharide kinase inaa | FCU47_09030 | Not Available | Positive | 1874614 - 1875264 | 25311.5 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | FCU47_09035 | Not Available | Negative | 1875318 - 1875572 | 9293.29 |
| ribonucleoside-diphosphate reductase 1 subunit beta | FCU47_09040 | Not Available | Negative | 1875572 - 1876702 | 43519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





