Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | FCU47_08770 | Not Available | Positive | 1819028 - 1819579 | 19992.1 |
| nudix hydrolase yfcd | FCU47_08775 | Not Available | Positive | 1819637 - 1820179 | 20376.9 |
| putative basic amino acid antiporter yfcc | FCU47_08780 | Not Available | Negative | 1820212 - 1821732 | 54800.0 |
| phosphate acetyltransferase | FCU47_08785 | Not Available | Negative | 1821922 - 1824066 | 77176.6 |
| acetate kinase | FCU47_08790 | Not Available | Negative | 1824141 - 1825343 | 43293.0 |
| duf412 domain-containing protein | FCU47_08795 | Not Available | Positive | 1825681 - 1826136 | 17214.1 |
| yfbu family protein | FCU47_08800 | Not Available | Positive | 1826219 - 1826713 | 19537.4 |
| hexitol phosphatase hpxa | FCU47_08805 | Not Available | Positive | 1826724 - 1827374 | 22999.8 |
| slc13 family permease | FCU47_08810 | Not Available | Positive | 1827461 - 1829293 | 65876.0 |
| 5'-deoxynucleotidase | FCU47_08815 | Not Available | Negative | 1829352 - 1829951 | 22725.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





