Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | FCU47_08415 | Not Available | Negative | 1743751 - 1744608 | 32416.5 |
| response regulator transcription factor | FCU47_08420 | Not Available | Negative | 1744621 - 1745355 | 28722.6 |
| sensor histidine kinase | FCU47_08425 | Not Available | Negative | 1745370 - 1747067 | 62661.3 |
| alanine transaminase | FCU47_08430 | Not Available | Positive | 1747444 - 1748682 | 46218.8 |
| membrane protein ypdk | FCU47_08435 | Not Available | Negative | 1748747 - 1748818 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | FCU47_08440 | Not Available | Negative | 1749174 - 1750094 | 35495.5 |
| duf2545 family protein | FCU47_08445 | Not Available | Positive | 1750447 - 1750689 | 8923.5 |
| colanic acid biosynthesis lipoprotein ypdi | FCU47_08450 | Not Available | Negative | 1750766 - 1751041 | 10210.5 |
| yfdx family protein | FCU47_08455 | Not Available | Positive | 1751337 - 1751969 | 22907.4 |
| formyl-coa--oxalate coa-transferase | FCU47_08460 | Not Available | Positive | 1752482 - 1753732 | 45830.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





