Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| naat family transporter yche | FCU47_08265 | Not Available | Negative | 1714902 - 1715549 | 23522.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | FCU47_08270 | Not Available | Positive | 1716026 - 1718701 | 96132.5 |
| thymidine kinase | FCU47_08275 | Not Available | Negative | 1719003 - 1719620 | 23355.8 |
| dna-binding transcriptional regulator h-ns | FCU47_08280 | Not Available | Positive | 1720224 - 1720637 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase galu | FCU47_08285 | Not Available | Negative | 1720781 - 1721689 | 32944.2 |
| two-component system response regulator rssb | FCU47_08290 | Not Available | Negative | 1721891 - 1722904 | 37304.5 |
| patatin-like phospholipase rssa | FCU47_08295 | Not Available | Negative | 1722996 - 1723901 | 33041.0 |
| ychj family protein | FCU47_08300 | Not Available | Positive | 1724014 - 1724472 | 16991.2 |
| formyltetrahydrofolate deformylase | FCU47_08305 | Not Available | Positive | 1724522 - 1725364 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 1725524 - 1725608 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





