Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | FCU47_08215 | Not Available | Positive | 1704481 - 1704777 | 10602.6 |
| voltage-gated potassium channel protein | FCU47_08220 | Not Available | Positive | 1705077 - 1706330 | 46080.2 |
| yciy family protein | FCU47_08225 | Not Available | Negative | 1706385 - 1706558 | 7102.81 |
| cardiolipin synthase | FCU47_08230 | Not Available | Positive | 1706701 - 1708161 | 54825.6 |
| duf440 family protein | FCU47_08235 | Not Available | Positive | 1708196 - 1708525 | 12687.7 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | FCU47_08240 | Not Available | Negative | 1708578 - 1709582 | 37183.8 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppd | FCU47_08245 | Not Available | Negative | 1709579 - 1710592 | 37148.7 |
| oligopeptide abc transporter permease oppc | FCU47_08250 | Not Available | Negative | 1710604 - 1711512 | 33023.9 |
| oligopeptide abc transporter permease oppb | FCU47_08255 | Not Available | Negative | 1711527 - 1712447 | 33445.3 |
| oligopeptide abc transporter substrate-binding protein oppa | FCU47_08260 | Not Available | Negative | 1712533 - 1714164 | 60979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





