Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyphenylacetyl-coa thioesterase paai | FCU47_07605 | Not Available | Negative | 1580865 - 1581287 | 14851.6 |
| 3-hydroxyacyl-coa dehydrogenase paac | FCU47_07610 | Not Available | Negative | 1581277 - 1582704 | 51706.6 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | FCU47_07615 | Not Available | Negative | 1582706 - 1583494 | 28452.4 |
| 2,3-dehydroadipyl-coa hydratase | FCU47_07620 | Not Available | Negative | 1583494 - 1584261 | 27239.0 |
| phenylacetate-coa oxygenase/reductase subunit paak | FCU47_07625 | Not Available | Negative | 1584258 - 1585328 | 39268.2 |
| phenylacetate degradation protein paad | FCU47_07630 | Not Available | Negative | 1585336 - 1585833 | 18280.0 |
| phenylacetate-coa oxygenase subunit paac | FCU47_07635 | Not Available | Negative | 1585848 - 1586594 | 27879.1 |
| 1,2-phenylacetyl-coa epoxidase subunit b | FCU47_07640 | Not Available | Negative | 1586603 - 1586890 | 10942.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | FCU47_07645 | Not Available | Negative | 1586902 - 1587831 | 35447.2 |
| phenylacetic acid degradation bifunctional protein paaz | FCU47_07650 | Not Available | Positive | 1588116 - 1590161 | 73004.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





