Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FCU47_07505 | Not Available | Positive | 1555616 - 1556539 | 33417.6 |
| methyl-accepting chemotaxis protein trg | FCU47_07510 | Not Available | Negative | 1556577 - 1558217 | 58902.3 |
| type i toxin-antitoxin system toxin hokb | FCU47_07515 | Not Available | Positive | 1558616 - 1558765 | 5656.18 |
| hypothetical protein | FCU47_07520 | Not Available | Negative | 1558837 - 1559010 | 5860.19 |
| cytochrome b561 | FCU47_07525 | Not Available | Negative | 1559255 - 1559785 | 20273.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | FCU47_07530 | Not Available | Positive | 1559974 - 1560975 | 35750.7 |
| aldehyde dehydrogenase | FCU47_07535 | Not Available | Negative | 1561017 - 1562456 | 52256.8 |
| ydcf family protein | FCU47_07540 | Not Available | Negative | 1562653 - 1563453 | 29721.4 |
| atp-dependent rna helicase hrpa | FCU47_07545 | Not Available | Negative | 1563725 - 1567627 | 148996.0 |
| fmn-dependent nadh-azoreductase | FCU47_07550 | Not Available | Positive | 1567828 - 1568433 | 21685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





