Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | FCU47_07185 | Not Available | Positive | 1498817 - 1499875 | 37961.4 |
| hypothetical protein | FCU47_07190 | Not Available | Positive | 1499889 - 1500116 | 8092.61 |
| exodeoxyribonuclease i | FCU47_07195 | Not Available | Negative | 1500159 - 1501583 | 54397.6 |
| isas1 family transposase | FCU47_07305 | Not Available | Negative | 1514433 - 1514547 | 4480.67 |
| hypothetical protein | FCU47_07310 | Not Available | Negative | 1514951 - 1515157 | 7908.66 |
| hypothetical protein | FCU47_07320 | Not Available | Negative | 1515939 - 1516337 | 15074.2 |
| rhs repeat protein | FCU47_07325 | Not Available | Negative | 1516338 - 1520558 | 157840.0 |
| type vi secretion system tip protein vgrg | FCU47_07330 | Not Available | Negative | 1520626 - 1522734 | 78741.8 |
| hypothetical protein | FCU47_07335 | Not Available | Negative | 1523555 - 1523767 | 8259.59 |
| glutathione s-transferase family protein | FCU47_07340 | Not Available | Negative | 1523843 - 1524460 | 23385.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





