Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2574 family protein | FCU47_06670 | Not Available | Positive | 1390773 - 1391054 | 10134.1 |
| type 1 fimbrial protein | FCU47_06675 | Not Available | Positive | 1391347 - 1391889 | 19075.6 |
| fimbrial assembly protein | FCU47_06680 | Not Available | Positive | 1391969 - 1392643 | 24864.4 |
| fimbrial biogenesis outer membrane usher protein | FCU47_06685 | Not Available | Positive | 1392659 - 1395139 | 92329.1 |
| putative fimbrial-like adhesin protein | FCU47_06690 | Not Available | Positive | 1395155 - 1396189 | 36959.0 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | FCU47_06695 | Not Available | Negative | 1396271 - 1396609 | 12494.9 |
| nickel/cobalt efflux protein rcna | FCU47_06700 | Not Available | Negative | 1396828 - 1397652 | 30441.2 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | FCU47_06705 | Not Available | Positive | 1397773 - 1398045 | 10134.5 |
| hydroxyethylthiazole kinase | FCU47_06710 | Not Available | Positive | 1398268 - 1399056 | 27282.6 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | FCU47_06715 | Not Available | Positive | 1399053 - 1399853 | 28635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





