Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | FCU47_06105 | Not Available | Positive | 1263420 - 1263680 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | FCU47_06110 | Not Available | Negative | 1263909 - 1264994 | 38899.3 |
| dna-binding protein ybib | FCU47_06115 | Not Available | Negative | 1265135 - 1266097 | 35050.7 |
| atp-dependent dna helicase ding | FCU47_06120 | Not Available | Negative | 1266125 - 1268275 | 81444.9 |
| n-glycosidase ybia | FCU47_06125 | Not Available | Positive | 1268395 - 1268877 | 18647.3 |
| atp-dependent rna helicase rhle | FCU47_06130 | Not Available | Negative | 1269109 - 1270473 | 50050.4 |
| dna-binding transcriptional regulator cecr | FCU47_06135 | Not Available | Positive | 1270702 - 1271373 | 25002.1 |
| secretion protein hlyd | FCU47_06140 | Not Available | Positive | 1271376 - 1272371 | 36268.7 |
| abc transporter atp-binding protein | FCU47_06145 | Not Available | Positive | 1272364 - 1274100 | 63149.3 |
| abc transporter permease | FCU47_06150 | Not Available | Positive | 1274093 - 1275226 | 42062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





