Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysis determining protein lyda | FCU47_15920 | Not Available | Negative | 3317085 - 3317414 | 11467.2 |
| Lydc | FCU47_15925 | Not Available | Negative | 3317482 - 3317763 | 10478.0 |
| Tail fiber assembly protein | FCU47_15930 | Not Available | Positive | 3318034 - 3318234 | 7109.51 |
| hypothetical protein | FCU47_15935 | Not Available | Negative | 3318215 - 3318448 | 8780.08 |
| Tail fiber protein | FCU47_15940 | Not Available | Negative | 3318817 - 3318900 | 2993.56 |
| Side tail fiber | FCU47_15945 | Not Available | Negative | 3318997 - 3319839 | 29168.6 |
| Tail fibrer protein gps | FCU47_15950 | Not Available | Negative | 3320716 - 3322488 | 60830.6 |
| Tail fiber protein r | FCU47_15955 | Not Available | Negative | 3322500 - 3322934 | 15974.1 |
| Putative tail tube structural protein gp16 | FCU47_15960 | Not Available | Negative | 3323013 - 3323849 | 31327.4 |
| Baseplate structural protein bpla | FCU47_15965 | Not Available | Negative | 3323849 - 3325282 | 53524.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





