Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC018 19_NODE_118 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252537 bp
Thymine Count
1254793 bp
Guanine Count
1275978 bp
Cytosine Count
1286764 bp
Genome Length
5070072 bp
Protein-coding Genes
4580 genes
Non-Coding Genes
284 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | FCU47_04940 | Not Available | Negative | 1005843 - 1006493 | 24326.3 |
| hypothetical protein | FCU47_04950 | Not Available | Positive | 1006839 - 1007057 | 8221.03 |
| duf945 domain-containing protein | FCU47_04960 | Not Available | Negative | 1007437 - 1007514 | 2702.1 |
| is3 family transposase | FCU47_04965 | Not Available | Positive | 1007515 - 1007809 | 11310.2 |
| ggdef domain-containing protein | FCU47_04970 | Not Available | Negative | 1007850 - 1009208 | 51800.5 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | FCU47_04975 | Not Available | Positive | 1009795 - 1012218 | 92279.0 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | FCU47_04980 | Not Available | Positive | 1012227 - 1014245 | 77416.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | FCU47_04985 | Not Available | Positive | 1014238 - 1015563 | 50768.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | FCU47_04990 | Not Available | Positive | 1015565 - 1015978 | 16082.7 |
| phosphate starvation-inducible protein phoh | FCU47_04995 | Not Available | Negative | 1016028 - 1016951 | 34284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





