Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ejection protein | FCU54_06550 | Not Available | Negative | 1360392 - 1362590 | 75612.0 |
| Dna injection protein | FCU54_06555 | Not Available | Negative | 1362590 - 1363885 | 46432.3 |
| Injection protein | FCU54_06560 | Not Available | Negative | 1363895 - 1364590 | 23615.7 |
| Head assembly protein | FCU54_06565 | Not Available | Negative | 1364593 - 1365048 | 17360.8 |
| Tail accessory protein | FCU54_06570 | Not Available | Negative | 1365048 - 1365749 | 25048.3 |
| Dna stabilization protein | FCU54_06575 | Not Available | Negative | 1365749 - 1367167 | 52270.8 |
| Tail hub protein | FCU54_06580 | Not Available | Negative | 1367167 - 1367667 | 17809.1 |
| hypothetical protein | FCU54_06585 | Not Available | Negative | 1367645 - 1367905 | 10001.5 |
| Coat protein | FCU54_06590 | Not Available | Negative | 1367950 - 1369245 | 46914.4 |
| Capsid and scaffolding protein | FCU54_06595 | Not Available | Negative | 1369245 - 1370156 | 33887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





