Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter atp-binding protein lsra | FCU54_00260 | Not Available | Positive | 69998 - 71533 | 55716.7 |
| autoinducer 2 abc transporter permease lsrc | FCU54_00265 | Not Available | Positive | 71527 - 72555 | 36489.3 |
| autoinducer 2 abc transporter permease lsrd | FCU54_00270 | Not Available | Positive | 72555 - 73547 | 34444.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | FCU54_00275 | Not Available | Positive | 73559 - 74581 | 36728.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | FCU54_00280 | Not Available | Positive | 74608 - 75483 | 31838.5 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | FCU54_00285 | Not Available | Positive | 75507 - 75797 | 11239.4 |
| trans-aconitate 2-methyltransferase | FCU54_00290 | Not Available | Positive | 75854 - 76612 | 29034.4 |
| bestrophin family inner membrane protein | FCU54_00295 | Not Available | Negative | 76616 - 77530 | 34811.0 |
| tagaturonate reductase | FCU54_00300 | Not Available | Negative | 77727 - 79178 | 54811.3 |
| ggdef domain-containing protein | FCU54_00305 | Not Available | Negative | 79406 - 80824 | 52095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





