Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein exbd | FCU54_04135 | Not Available | Negative | 836051 - 836476 | 15527.9 |
| biopolymer transporter exbb | FCU54_04140 | Not Available | Negative | 836483 - 837217 | 26289.0 |
| cystathionine beta-lyase | FCU54_04145 | Not Available | Positive | 837469 - 838656 | 43186.7 |
| deda family protein | FCU54_04150 | Not Available | Positive | 838796 - 839455 | 24135.3 |
| arac family transcriptional regulator | FCU54_04155 | Not Available | Negative | 839495 - 840394 | 33817.1 |
| alcohol dehydrogenase | FCU54_04160 | Not Available | Positive | 840588 - 841751 | 42099.4 |
| 2,5-didehydrogluconate reductase dkga | FCU54_04165 | Not Available | Positive | 841856 - 842683 | 31111.4 |
| duf3828 domain-containing protein | FCU54_04170 | Not Available | Positive | 842883 - 843809 | 34975.0 |
| lipoprotein yqhh | FCU54_04175 | Not Available | Positive | 843860 - 844117 | 9513.58 |
| ygiq family radical sam protein | FCU54_04180 | Not Available | Negative | 844160 - 846379 | 83482.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





