Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | FCU54_03930 | Not Available | Negative | 788106 - 790166 | 74192.1 |
| type ii secretion system protein gspc | FCU54_03935 | Not Available | Negative | 790196 - 791155 | 35850.4 |
| hypothetical protein | FCU54_03940 | Not Available | Negative | 791173 - 791583 | 14640.8 |
| prepilin peptidase | FCU54_03945 | Not Available | Negative | 791649 - 792458 | 29471.8 |
| duf4092 domain-containing protein | FCU54_03950 | Not Available | Negative | 792588 - 797153 | 168152.0 |
| glycolate permease glca | FCU54_03955 | Not Available | Negative | 797637 - 799319 | 58923.7 |
| malate synthase g | FCU54_03960 | Not Available | Negative | 799674 - 801845 | 80447.2 |
| protein glcg | FCU54_03965 | Not Available | Negative | 801867 - 802271 | 13737.5 |
| glycolate oxidase subunit glcf | FCU54_03970 | Not Available | Negative | 802276 - 803499 | 45086.7 |
| glycolate oxidase subunit glce | FCU54_03975 | Not Available | Negative | 803510 - 804562 | 38325.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





