Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | FCU54_03880 | Not Available | Negative | 778856 - 779632 | 29563.4 |
| type ii secretion system protein | FCU54_03885 | Not Available | Negative | 780694 - 781230 | 20381.8 |
| type ii secretion system protein gspl | FCU54_03890 | Not Available | Negative | 781232 - 782410 | 44241.4 |
| general secretion pathway protein gspk | FCU54_03895 | Not Available | Negative | 782407 - 783384 | 36500.3 |
| type ii secretion system protein gspj | FCU54_03900 | Not Available | Negative | 783381 - 783986 | 22380.4 |
| type ii secretion system protein gspi | FCU54_03905 | Not Available | Negative | 783983 - 784354 | 13682.5 |
| type ii secretion system protein gsph | FCU54_03910 | Not Available | Negative | 784351 - 784914 | 21217.8 |
| type ii secretion system protein gspg | FCU54_03915 | Not Available | Negative | 784918 - 785373 | 16647.8 |
| type ii secretion system protein gspf | FCU54_03920 | Not Available | Negative | 785390 - 786613 | 44926.7 |
| type ii secretion system protein gspe | FCU54_03925 | Not Available | Negative | 786613 - 788106 | 55207.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





