Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | FCU54_03770 | Not Available | Positive | 759035 - 759856 | 31305.5 |
| antirestriction protein | FCU54_03775 | Not Available | Positive | 759948 - 760433 | 18178.4 |
| dna repair protein radc | FCU54_03780 | Not Available | Positive | 760448 - 760924 | 17662.4 |
| duf987 domain-containing protein | FCU54_03785 | Not Available | Positive | 760987 - 761208 | 8309.11 |
| antitoxin of toxin-antitoxin stability system | FCU54_03790 | Not Available | Positive | 761227 - 761871 | 25040.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | FCU54_03795 | Not Available | Positive | 761921 - 762289 | 13711.2 |
| toxin | FCU54_03800 | Not Available | Positive | 762379 - 762756 | 14172.9 |
| hypothetical protein | FCU54_03805 | Not Available | Positive | 762753 - 763241 | 17980.4 |
| duf957 domain-containing protein | FCU54_03810 | Not Available | Positive | 763253 - 763429 | 6523.67 |
| duf4942 domain-containing protein | FCU54_03820 | Not Available | Positive | 764257 - 764376 | 4562.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





