Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| common pilus major fimbrillin subunit ecpa | FCU54_03445 | Not Available | Positive | 703479 - 704066 | 20082.4 |
| fimbrial chaperone ecpb | FCU54_03450 | Not Available | Positive | 704124 - 704792 | 24484.3 |
| hypothetical protein | FCU54_03455 | Not Available | Positive | 704818 - 707343 | 91297.7 |
| fimbrial adhesin ecpd | FCU54_03460 | Not Available | Positive | 707333 - 708976 | 59937.1 |
| hypothetical protein | FCU54_03465 | Not Available | Positive | 708945 - 709655 | 26650.7 |
| ykgj family cysteine cluster protein | FCU54_03470 | Not Available | Positive | 709968 - 710297 | 11799.1 |
| duf1440 domain-containing protein | FCU54_03480 | Not Available | Negative | 710547 - 711161 | 22968.1 |
| hypothetical protein | FCU54_03485 | Not Available | Negative | 711376 - 711561 | 6718.26 |
| site-specific integrase | FCU54_03495 | Not Available | Positive | 711905 - 713110 | 46144.6 |
| n-acetyltransferase | FCU54_03500 | Not Available | Negative | 713091 - 713669 | 22072.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





