Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate transporter cynx | FCU54_03190 | Not Available | Negative | 645030 - 646211 | 42450.4 |
| cyanase | FCU54_03195 | Not Available | Negative | 646217 - 646687 | 17033.8 |
| carbonic anhydrase | FCU54_03200 | Not Available | Negative | 646718 - 647377 | 23717.6 |
| transcriptional regulator cynr | FCU54_03205 | Not Available | Positive | 647487 - 648386 | 32824.6 |
| cytosine deaminase | FCU54_03210 | Not Available | Negative | 648519 - 649802 | 47623.9 |
| cytosine permease | FCU54_03215 | Not Available | Negative | 649792 - 651051 | 43652.3 |
| propionate--coa ligase | FCU54_03220 | Not Available | Negative | 651288 - 653174 | 69495.0 |
| 2-methylcitrate dehydratase | FCU54_03225 | Not Available | Negative | 653214 - 654665 | 53968.7 |
| 2-methylcitrate synthase | FCU54_03230 | Not Available | Negative | 654699 - 655868 | 43105.6 |
| methylisocitrate lyase | FCU54_03235 | Not Available | Negative | 656028 - 656918 | 32135.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





