Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgrr family transcriptional regulator | FCU54_02660 | Not Available | Positive | 535792 - 537492 | 64927.2 |
| 7-cyano-7-deazaguanine synthase quec | FCU54_02665 | Not Available | Positive | 537557 - 538252 | 25439.4 |
| ybgc/fadm family acyl-coa thioesterase | FCU54_02670 | Not Available | Negative | 538304 - 538702 | 15089.2 |
| hypothetical protein | FCU54_02675 | Not Available | Negative | 538808 - 539179 | 12716.4 |
| peptidylprolyl isomerase | FCU54_02680 | Not Available | Negative | 539330 - 541201 | 68139.7 |
| dna-binding protein hu-beta | FCU54_02685 | Not Available | Negative | 541393 - 541665 | 9226.08 |
| lon protease | FCU54_02690 | Not Available | Negative | 541874 - 544228 | 87443.4 |
| atp-dependent clp protease atp-binding subunit clpx | FCU54_02695 | Not Available | Negative | 544416 - 545690 | 46358.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | FCU54_02700 | Not Available | Negative | 545816 - 546439 | 23188.1 |
| trigger factor | FCU54_02705 | Not Available | Negative | 546685 - 547983 | 48195.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





