Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein yebg | FCU54_01855 | Not Available | Negative | 388834 - 389124 | 10717.5 |
| formate-dependent phosphoribosylglycinamide formyltransferase | FCU54_01860 | Not Available | Positive | 389258 - 390436 | 42485.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | FCU54_01865 | Not Available | Negative | 390492 - 391133 | 22301.3 |
| phosphogluconate dehydratase | FCU54_01870 | Not Available | Negative | 391170 - 392981 | 64642.9 |
| glucose-6-phosphate dehydrogenase | FCU54_01875 | Not Available | Negative | 393216 - 394691 | 55707.5 |
| murr/rpir family transcriptional regulator | FCU54_01880 | Not Available | Positive | 395029 - 395898 | 31959.3 |
| pyruvate kinase | FCU54_01885 | Not Available | Positive | 396026 - 397468 | 51374.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | FCU54_01890 | Not Available | Negative | 397600 - 398571 | 37412.5 |
| murein dd-endopeptidase mepm | FCU54_01895 | Not Available | Negative | 398691 - 400013 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | FCU54_01900 | Not Available | Negative | 400029 - 400961 | 33921.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





